euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

182 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip12 chr1 5733841 5733841 - unknown germline . no 264 .
srip879 chr1 56535813 56535813 - unknown germline . no 264 .
srip2807 chr1 101978984 101978984 - unknown germline . no 264 .
srip4491 chr1 158998588 158998588 . unknown germline . no 264 IFI16
srip5056 chr1 169524865 169524865 + unknown germline . no 264 F5
srip5556 chr1 183969678 183969678 - unknown germline . no 264 GLT25D2
srip6398 chr1 210245871 210245871 - unknown germline . no 264 SYT14
srip7393 chr1 242311570 242311570 + unknown germline . no 264 PLD5
srip8007 chr10 19216654 19216654 + unknown germline . no 264 .
srip8114 chr10 23842050 23842050 - unknown germline . no 264 .
srip8457 chr10 25707693 25707693 - unknown germline . no 264 GPR158
srip9820 chr10 82972200 82972200 . unknown germline . no 264 .
srip11840 chr10 124455225 124455225 + unknown germline . no 264 .
srip12804 chr11 25123346 25123346 - unknown germline . no 264 .
srip13831 chr11 33670130 33670130 + unknown germline . no 264 C11orf41
srip14255 chr11 41831803 41831803 - unknown germline . no 264 .
srip14728 chr11 48360744 48360744 - unknown germline . no 264 .
srip15044 chr11 50719153 50719153 + unknown germline . no 264 .
srip15048 chr11 50760565 50760565 . unknown germline . no 264 .
srip15372 chr11 58171843 58171843 + unknown germline . no 264 .
srip17321 chr11 97434305 97434305 - unknown germline . no 264 .
srip18237 chr11 112084613 112084613 + unknown germline . no 264 BCO2
srip18335 chr11 121131527 121131527 - unknown germline . no 264 .
srip19277 chr11 134305645 134305645 - unknown germline . no 264 .
srip19898 chr12 11219195 11219195 - unknown germline . no 264 PRH1-PRR4
srip20141 chr12 12933687 12933687 - unknown germline . no 264 APOLD1
srip21166 chr12 34017331 34017331 - unknown germline . no 264 .
srip22231 chr12 43256979 43256979 - unknown germline . no 264 .
srip22832 chr12 48929058 48929058 + unknown germline . no 264 .
srip24633 chr12 84965140 84965140 + unknown germline . no 264 .
srip25107 chr12 95808453 95808453 - unknown germline . no 264 .
srip25204 chr12 97660366 97660366 + unknown germline . no 264 .
srip25322 chr12 99985838 99985838 - unknown germline . no 264 ANKS1B
srip26077 chr12 118186932 118186932 + unknown germline . no 264 KSR2
srip26642 chr12 127879768 127879768 . unknown germline . no 264 .
srip26900 chr13 22489798 22489798 + unknown germline . no 264 .
srip27861 chr13 40123138 40123138 . unknown germline . no 264 LHFP
srip29070 chr13 61462340 61462340 - unknown germline . no 264 .
srip29656 chr13 61734491 61734491 . unknown germline . no 264 .
srip29749 chr13 64569846 64569846 - unknown germline . no 264 .
srip30994 chr13 79259790 79259790 - unknown germline . no 264 .
srip31569 chr13 85871605 85871605 - unknown germline . no 264 .
srip32098 chr13 87761350 87761350 . unknown germline . no 264 .
srip32317 chr13 91149416 91149416 - unknown germline . no 264 .
srip32489 chr13 93732305 93732305 . unknown germline . no 264 .
srip33176 chr13 101737290 101737290 + unknown germline . no 264 NALCN
srip33532 chr13 104296230 104296230 - unknown germline . no 264 .
srip35229 chr14 28301256 28301256 + unknown germline . no 264 .
srip35469 chr14 31150817 31150817 - unknown germline . no 264 SCFD1
srip35881 chr14 36674752 36674752 + unknown germline . no 264 .
srip36308 chr14 39875089 39875089 + unknown germline . no 264 FBXO33
srip38140 chr14 71197789 71197789 + unknown germline . no 264 MAP3K9
srip39018 chr15 20432178 20432178 - unknown germline . no 264 .
srip39019 chr15 21107412 21107412 . unknown germline . no 264 LOC100287908
srip39021 chr15 21917774 21917774 . unknown germline . no 264 .
srip39022 chr15 22344097 22344097 - unknown germline . no 264 LOC727924
srip39337 chr15 28175795 28175795 - unknown germline . no 264 OCA2
srip39350 chr15 31576705 31576705 . unknown germline . no 264 .
srip39624 chr15 36432960 36432960 - unknown germline . no 264 .
srip39825 chr15 37743013 37743013 + unknown germline . no 264 .
srip39935 chr15 46539448 46539448 + unknown germline . no 264 .
srip40706 chr15 51661368 51661368 . unknown germline . no 264 GLDN
srip41335 chr15 58580776 58580776 . unknown germline . no 264 .
srip42051 chr15 71780863 71780863 . unknown germline . no 264 THSD4
srip42447 chr15 83551620 83551620 - unknown germline . no 264 HOMER2
srip42677 chr15 95443970 95443970 . unknown germline . no 264 .
srip42980 chr15 98199977 98199977 + unknown germline . no 264 .
srip43020 chr15 98622503 98622503 + unknown germline . no 264 .
srip43062 chr15 100411985 100411985 . unknown germline . no 264 .
srip43814 chr16 7156635 7156635 . unknown germline . no 264 RBFOX1
srip44093 chr16 17755307 17755307 - unknown germline . no 264 .
srip45200 chr16 32582680 32582680 . unknown germline . no 264 .
srip45212 chr16 32843438 32843438 . unknown germline . no 264 .
srip45213 chr16 33498811 33498811 . unknown germline . no 264 LOC653557
srip45553 chr16 50086464 50086464 - unknown germline . no 264 .
srip45728 chr16 55327569 55327569 + unknown germline . no 264 .
srip46341 chr16 71028016 71028016 + unknown germline . no 264 HYDIN
srip47217 chr17 28398310 28398310 + unknown germline . no 264 EFCAB5
srip47692 chr17 32813627 32813627 + unknown germline . no 264 .
srip48367 chr17 68357404 68357404 + unknown germline . no 264 .
srip48985 chr18 15095255 15095255 - unknown germline . no 264 .
srip50030 chr18 49216225 49216225 - unknown germline . no 264 .
srip51620 chr18 74515281 74515281 - unknown germline . no 264 LOC100131655
srip53482 chr2 23191008 23191008 - unknown germline . no 264 .
srip53685 chr2 24796764 24796764 + unknown germline . no 264 .
srip56222 chr2 82098035 82098035 + unknown germline . no 264 .
srip57737 chr2 129573979 129573979 + unknown germline . no 264 .
srip59211 chr2 147020925 147020925 + unknown germline . no 264 .
srip59621 chr2 156527835 156527835 + unknown germline . no 264 .
srip59769 chr2 168735521 168735521 - unknown germline . no 264 .
srip60154 chr2 178676252 178676252 - unknown germline . no 264 PDE11A
srip61934 chr2 221278227 221278227 - unknown germline . no 264 .
srip63467 chr20 16479499 16479499 - unknown germline . no 264 KIF16B
srip64048 chr20 25895497 25895497 - unknown germline . no 264 .
srip64068 chr20 25903875 25903875 - unknown germline . no 264 .
srip64090 chr20 26249103 26249103 + unknown germline . no 264 LOC100287605
srip64783 chr20 41952105 41952105 - unknown germline . no 264 .
srip65422 chr21 10799227 10799227 - unknown germline . no 264 .
srip66910 chr21 29069176 29069176 + unknown germline . no 264 .
srip68764 chr22 44324597 44324597 - unknown germline . no 264 PNPLA3
srip70462 chr3 20748900 20748900 - unknown germline . no 264 .
srip71324 chr3 30419389 30419389 - unknown germline . no 264 .
srip73885 chr3 75108352 75108352 + unknown germline . no 264 .
srip75082 chr3 84433390 84433390 + unknown germline . no 264 .
srip75579 chr3 85576556 85576556 + unknown germline . no 264 CADM2
srip77244 chr3 123590719 123590719 + unknown germline . no 264 MYLK
srip77312 chr3 124808630 124808630 . unknown germline . no 264 SLC12A8
srip79875 chr3 169269958 169269958 + unknown germline . no 264 MECOM
srip80344 chr3 176091325 176091325 + unknown germline . no 264 .
srip81498 chr3 186372133 186372133 + unknown germline . no 264 .
srip83852 chr4 29321856 29321856 + unknown germline . no 264 .
srip84721 chr4 47007787 47007787 - unknown germline . no 264 .
srip85376 chr4 57497059 57497059 - unknown germline . no 264 .
srip86168 chr4 66413931 66413931 + unknown germline . no 264 EPHA5
srip86337 chr4 66809073 66809073 - unknown germline . no 264 .
srip87107 chr4 74243693 74243693 + unknown germline . no 264 .
srip87341 chr4 80768529 80768529 + unknown germline . no 264 GDEP
srip88902 chr4 103343751 103343751 + unknown germline . no 264 .
srip89683 chr4 111271156 111271156 - unknown germline . no 264 .
srip89970 chr4 112628966 112628966 + unknown germline . no 264 .
srip90339 chr4 115132699 115132699 + unknown germline . no 264 .
srip90716 chr4 118765257 118765257 + unknown germline . no 264 .
srip92200 chr4 134596423 134596423 + unknown germline . no 264 .
srip92818 chr4 138177329 138177329 + unknown germline . no 264 .
srip92863 chr4 138413561 138413561 - unknown germline . no 264 .
srip93887 chr4 158907280 158907280 - unknown germline . no 264 .
srip94638 chr4 174035603 174035603 + unknown germline . no 264 .
srip95387 chr4 190659701 190659701 . unknown germline . no 264 .
srip96895 chr5 21207723 21207723 + unknown germline . no 264 .
srip96936 chr5 21899840 21899840 + unknown germline . no 264 CDH12
srip97763 chr5 33633341 33633341 . unknown germline . no 264 ADAMTS12
srip99499 chr5 68263468 68263468 - unknown germline . no 264 .
srip100732 chr5 89450775 89450775 + unknown germline . no 264 .
srip103352 chr5 125040043 125040043 + unknown germline . no 264 .
srip103786 chr5 137014782 137014782 - unknown germline . no 264 KLHL3
srip105256 chr5 155619871 155619871 + unknown germline . no 264 .
srip105736 chr5 160435672 160435672 - unknown germline . no 264 .
srip107509 chr6 13503042 13503042 + unknown germline . no 264 .
srip107930 chr6 32457266 32457266 + unknown germline . no 264 .
srip108002 chr6 32509105 32509105 - unknown germline . no 264 .
srip108710 chr6 46310298 46310298 + unknown germline . no 264 .
srip109136 chr6 57494221 57494221 - unknown germline . no 264 PRIM2
srip111044 chr6 77980645 77980645 - unknown germline . no 264 .
srip112059 chr6 91669514 91669514 - unknown germline . no 264 .
srip112694 chr6 102283763 102283763 - unknown germline . no 264 GRIK2
srip113802 chr6 142450105 142450105 - unknown germline . no 264 .
srip116168 chr7 8886711 8886711 + unknown germline . no 264 .
srip116209 chr7 10500040 10500040 . unknown germline . no 264 .
srip116256 chr7 12725156 12725156 + unknown germline . no 264 .
srip116627 chr7 27307051 27307051 . unknown germline . no 264 .
srip116630 chr7 27497411 27497411 + unknown germline . no 264 LOC401316
srip116885 chr7 41310792 41310792 - unknown germline . no 264 .
srip117634 chr7 53652509 53652509 - unknown germline . no 264 .
srip117905 chr7 57768961 57768961 - unknown germline . no 264 LOC100287663
srip119680 chr7 84901723 84901723 - unknown germline . no 264 .
srip120251 chr7 85044744 85044744 + unknown germline . no 264 .
srip121763 chr7 107829256 107829256 + unknown germline . no 264 NRCAM
srip122010 chr7 108325669 108325669 + unknown germline . no 264 .
srip122280 chr7 110484750 110484750 + unknown germline . no 264 IMMP2L
srip124074 chr8 4452901 4452901 - unknown germline . no 264 CSMD1
srip124389 chr8 5829282 5829282 - unknown germline . no 264 .
srip125440 chr8 24926547 24926547 - unknown germline . no 264 .
srip126895 chr8 67381884 67381884 - unknown germline . no 264 .
srip127455 chr8 72399228 72399228 - unknown germline . no 264 .
srip129128 chr8 115788572 115788572 - unknown germline . no 264 .
srip129649 chr8 119721694 119721694 - unknown germline . no 264 SAMD12-AS1
srip130130 chr8 131041227 131041227 + unknown germline . no 264 .
srip131088 chr9 6290487 6290487 + unknown germline . no 264 .
srip131550 chr9 9236605 9236605 . unknown germline . no 264 PTPRD
srip131732 chr9 19671056 19671056 - unknown germline . no 264 SLC24A2
srip132364 chr9 30495885 30495885 - unknown germline . no 264 .
srip133420 chr9 32463891 32463891 - unknown germline . no 264 DDX58
srip133645 chr9 34904794 34904794 - unknown germline . no 264 .
srip135093 chr9 105073662 105073662 . unknown germline . no 264 .
srip135586 chr9 111564966 111564966 + unknown germline . no 264 .
srip135885 chr9 118083873 118083873 - unknown germline . no 264 DEC1
srip137355 chrX 55264659 55264659 - unknown germline . no 264 .
srip137565 chrX 55585152 55585152 - unknown germline . no 264 .
srip139175 chrX 81695652 81695652 + unknown germline . no 264 .
srip140528 chrX 116025284 116025284 + unknown germline . no 264 .
srip141080 chrX 122664864 122664864 - unknown germline . no 264 .
srip142266 chrY 13137813 13137813 . unknown germline . no 264 .